List of Publications - Year 2004

1. International Journals

• Masseroli M, Martucci D, Pinciroli F. GFINDer: Genome Function INtegrated Discoverer through dynamic annotation, statistical analysis, and mining. Nucleic Acids Res. 2004 Jul 1;32:W293-W300.

• Barber B, Gritzalis D, Louwerse K, Pinciroli F. Introduction - Editorial. Int J Med Inform. 2004 Mar 31;73(3):215-6.

• Reni G, Molteni M, Arlotti S, Pinciroli F. Chief medical officer actions on information security in an Italian rehabilitation centre. Int J Med Inform. 2004 Mar 31;73(3):271-9.

• Cavalli E, Mattasoglio A, Pinciroli F, Spaggiari P. Information security concepts and practices: the case of a provincial multi-specialty hospital. Int J Med Inform. 2004 Mar 31;73(3):297-303.

• Masseroli M, Stella A, Meani N, Alcalay M, Pinciroli F. MyWEST: My web extraction software tool for effective mining of annotations from web-based databanks. Bioinformatics 2004; 20(18):3326-3335.

2. Chapters in International Books

• Pinciroli F, Masseroli M, Acerbo LA, Bonacina S, Ferrari R, Marchente M. BIRD: Bio-Image Referral Database. Design and implementation of a new web based and patient multimedia data focused system for effective medical diagnosis and therapy. In: Phillips R, Hoffman HM, Haluck RS, Mogel GT, Robb RA, Westwood JD, editors. Medicine Meets Virtual Reality 12. Building a Better You: The Next Tools for Medical Education, Diagnosis, and Care. ISBN 1-58603-404-9. Amsterdam, The Netherlands: IOS Press; 2004. p. 301-303. (Studies in Health Technology and Informatics; vol 98).

• Bonacina S, Menegoni F, Pinciroli F, Masseroli M. A 3D interactive multimodal viewer as data mining tool for the Visible Human Dataset color image histograms. In: Phillips R, Hoffman HM, Haluck RS, Mogel GT, Robb RA, Westwood JD, editors. Medicine Meets Virtual Reality 12. Building a Better You: The Next Tools for Medical Education, Diagnosis, and Care. ISBN 1-58603-404-9. Amsterdam, The Netherlands: IOS Press; 2004. p. 28-30. (Studies in Health Technology and Informatics; vol 98).

• Martucci D, Masseroli M, Pinciroli F. Gene Ontology application to genomic functional annotation, statistical analysis and knowledge mining. In: Pisanelli DM, editor. Ontologies in Medicine. ISBN 1-58603-418-9. Amsterdam, NL: IOS Press; 2004. p. 108-131. (Studies in Health Technology and Informatics; vol 102).

• Pinciroli F, Corbetta E, Tamburini MF, Mattasoglio A, Bonacina S, Masseroli M, Meloni G, Spaggiari P. Speak-ER: an audible web-based medical record for emergency patients. In: Demiris G, editor. e-health: current status and future trends. ISBN 1 58603 442 1. Amsterdam, The Netherlands: IOS Press; 2004. p. 93-106. (Studies in Health Technology and Informatics; vol 106).

• Catania F, Colombo C, Marzegalli M, Borghi G, Pinciroli F. Service level web monitoring in the field management of emergencies. In: Demiris G, editor. e-health: current status and future trends. ISBN 1 58603 442 1. Amsterdam, The Netherlands: IOS Press; 2004. p. 123-136. (Studies in Health Technology and Informatics; vol 106).

3. International Congress Proceedings

• Masseroli M, Stella A, Meani N, Alcalay M, Pinciroli F. GeneWebEx: Gene annotation Web Extraction, aggregation, and updating from web biomolecular databanks. In: Miyano S, Tsai JJP, Kao CY, editors. BIBE 2004: Proceedings of the IEEE Fourth Symposium on Bioinformatics and Bioengineering. IEEE Computer Society Press, Los Alamitos, CA; 2004; 199-206.

• Masseroli M, Martucci D, Pinciroli F. A three-layer multi-database system for functional statistical analyses of microarray experiment results. In: Hudson D, editor. EMBC 2004. Proceedings of the 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. [CD-ROM] ISBN 0-7803-8440-7. Omnipress, Madison, WI; 2004; p. 2805-8.

• Masseroli M, Bonacina S, Pinciroli F. Java-based browsing, visualization and processing of heterogeneous medical data from remote repositories. In: Hudson D, editor. EMBC 2004. Proceedings of the 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. [CD-ROM] ISBN 0-7803-8440-7. Omnipress, Madison, WI; 2004; p. 3326-9.

• Pinciroli F, Mottadelli S, Vinci M, Fabbro F, Gothager K. A knowledge management system for new drug submission by pharma-industries. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 241-245.

• Bernini B, Bachmann L, Tardini S, Cantoni L, Pinciroli F, Masseroli M. A web-based distance learning multilingual course of first-aid practice for dentists. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1522.

• Bonacina S, Masseroli M, Pinciroli F. Investigating the impact of data mining techniques in recent biomedical research. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1532.

• Carrara GE, Masseroli M, Pinciroli F. Comparative analysis of wrapper tools for data extraction from web-based biomolecular databanks. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1541.

• Castelli A, Colombo C, Frumento E, Pinciroli F. An Africa-Europe corporate hospital total infrastructure implemented for a multinational oil company. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1542.

• Martucci D, Masseroli M, Pinciroli F. A new web tool for statistical functional annotation of microarray data. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1743.

• Masseroli M, Pistella D, Pinciroli F. A web service approach for querying and retrieving biomedical data from heterogeneous sources. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1744.

• Masseroli M, Martucci D, Pinciroli F. Towards biological knowledge mining by statistical analysis of Gene Ontology annotations. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1745.

• Pinciroli F, Colombo C, Castelli A, Frumento E, Borghi G, Cerutti S, Crivellini M, Masella C, Masseroli M, Pizzutilo F. A one year "training on the job" advanced course on telemedicine open to both technical and clinical graduates. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1809.

• Pistella D, Masseroli M, Pinciroli F. A new web system for automatic retrieval of biomedical data from multiple internet based resources. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1811.

• Zocchi C, Masseroli M, Pinciroli F. A dental laboratory's web site improving communication and data sharing between odontologists, patients and dentists. In: Fieschi M, Coiera E, Li Y-CJ, editors. Medinfo 2004. Proceedings of the 11th World Congress on Medical Informatics; [CD-ROM] ISBN 1-58603-444-8. IOS-Press, Amsterdam, NL; 2004. p. 1934.

• Martucci D, Pinciroli F, Masseroli M. A web-based tool for genomic functional annotation, statistical analysis and data mining. In: Bracale M, editor. MEDICON and HEALTH TELEMATICS 2004. Proceedings of the X Mediterranean Conference on Medical and Biological Engineering; [CD-ROM] ISBN 88-7780-308-8. Ghedimedia, Milano, IT; 2004. BFG-031; 4 pp.

• Bonacina S, Menegoni F, Masseroli M, Pinciroli F. Visible Human Dataset color image histograms: 3D web juggler. In: Bracale M, editor. MEDICON and HEALTH TELEMATICS 2004. Proceedings of the X Mediterranean Conference on Medical and Biological Engineering; [CD-ROM] ISBN 88-7780-308-8. Ghedimedia, Milano, IT; 2004. MIT03-280; 4 pp.

• Carrara GE, Masseroli M, Pinciroli F. Comparative evaluation of wrapper tools for data extraction from biomolecular data-rich web pages. In: Bracale M, editor. MEDICON and HEALTH TELEMATICS 2004. Proceedings of the X Mediterranean Conference on Medical and Biological Engineering; [CD-ROM] ISBN 88-7780-308-8. Ghedimedia, Milano, IT; 2004. POS01-455; 4 pp.

• Masseroli M, Visconti A, Bano SG, Pinciroli F. He@lth-Coop: towards a distributed information system for healthcare cooperative work. In: Bracale M, editor. MEDICON and HEALTH TELEMATICS 2004. Proceedings of the X Mediterranean Conference on Medical and Biological Engineering; [CD-ROM] ISBN 88-7780-308-8. Ghedimedia, Milano, IT; 2004. TLM04-378; 4 pp.

• Pistella D, Masseroli M, Pinciroli F. A web retrieval system for querying multiple internet-based biomedical databanks. In: Bracale M, editor. MEDICON and HEALTH TELEMATICS 2004. Proceedings of the X Mediterranean Conference on Medical and Biological Engineering; [CD-ROM] ISBN 88-7780-308-8. Ghedimedia, Milano, IT; 2004. TLM04-379; 4 pp.

4. National Journals

• Pinciroli F. Editoriale sulla telemedicina. In Moruzzi M, Cipolla C. (a cura di) Telemedicina. Salute e Società 2004;3 (Supplemento):9-11. ISSN: 1723-9427.

5. National Congress Proceedings

• Masseroli M, Stella A, Carrara GE, Mazzarani M, Alcalay M, Pinciroli F. Effective use of web-based public genomic databanks for automatic and updated personal annotations and analyses of microarray experiment results. In: Atti del Convegno Microarray Meeting 2004: IV° Convegno nazionale sulla tecnologia. Array Technology Group - LITA. Milano, IT; 2004; 72-82.

• Martucci D, Pinciroli F, Masseroli M. Statistical functional genomic analyses for the biological interpretation of high-throughput gene expression data. In: Atti del Convegno Microarray Meeting 2004: IV° Convegno nazionale sulla tecnologia. Array Technology Group - LITA. Milano, IT; 2004; 96-110.

• Masseroli M, Martucci D, Pinciroli F. Genome dynamic and statistical functional annotations for biological knowledge mining from microarray data. In: Book of the BITS 2004: Bioinformatics ITalian Society Meeting, 2004 March 26-27, Padova, IT. 2004; pp. 28-29.

• Carrara GE, Stella A, Pinciroli F, Alcalay M, Masseroli M. Automatic extraction of gene annotations from data-rich HTML pages. In: Book of the BITS 2004: Bioinformatics ITalian Society Meeting, 2004 March 26-27, Padova, IT. 2004; pp. 92-93.

• Martucci D, Masseroli M. Biomolecular databanks and bio-ontologies for the interpretation of high-throughput technology results. In: web site of Bioforum: "Biotechnologies: where science meets business", 2004 September 22-24, Milano, IT. 2004. Available at URL address: http://www.bioforum.it/ documentazione/22_bioinformatica/17.20_Martucci-Masseroli.pdf, 29 pp.